It may have nothing to do with your problem, but its worth a try.
Here is a section from the Open Pilot website.
If you power the flight controller through the servo connectors (utilising the BEC function of the speed controller), the positive power lead from only one ESC is truly necessary. In most cases, all the wires can be left intact and plugged into the board without any problem. If you experience problems with setup or know for a fact that your particular ESC model requires it, you may remove the positive and negative pins from all but one of the ESC servo connectors. In some ESCs (very few, actually), connecting multiple voltage regulators (built in to the ESC's) in parallel could cause problems. Also, in rare cases, connecting multiple ground wires could cause ground loops, so remove the extra ground pins only if experiencing weird problems.